The invention provides deglycosylated holothurian secondary 
saponin and a preparation method of the deglycosylated holothurian secondary 
saponin. For the deglycosylated holothurian secondary 
saponin, two rear 
glycosyl radicals on 
carbohydrate chains of holothurian A (HA) and Echinoside A (EA) are removed through the enzymolysis of glycosidase, and thus the secondary saponin is obtained. The preparation method of the secondary saponin comprises the following steps: 
alcohol digestion, crude extraction adopting 
macroporous resin, and purification adopting a silicagel column, thus HA and EA are obtained, finally, enzymolysis is carried out by adopting glycosidase, and thus deglycosylated HA secondary saponin and EA secondary saponin are obtained respectively. According to the deglycosylated holothurian secondary saponin and the preparation method of the deglycosylated holothurian secondary saponin, through the used glycosidase, holothurian saponin forms secondary saponin through enzymolysis under the mild condition, so that the 
toxicity of holothurian saponin is reduced, and the 
biological activity of holothurian saponin is improved; meanwhile, glycosidase is adopted for enzymolysis of holothurian saponin, so that the 
side reaction and by-products brought by micro-biological degradation or degradation adopting crude 
enzyme extracted from microbes are avoided, the purity and yield of the enzymolysis products are improved, the 
single product can be obtained, and the purity can achieve 100%.